ADASTRA v1.6.10
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rs157928
chr7:130896599
T
>
C
Sequence
ccctgctggccagtctgtcttcca[T/C]ttctttctttttcttccaaaaaaa
ASB in cell types
foreskin keratinocyte
22RV1 (prostate carcinoma)
MCF7 (Invasive ductal breast carcinoma)
SK-N-SH (neuroblastoma)
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(+2 others)
ASB for transcription factors
CTCF_HUMAN
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN
0.60
1.37
1.00
9.0·10
-5
1.86
n/a
No Hit
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5
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Motif analysis
No data available
Genetic associations
GRASP
hdl cholesterol
GTEx eQTL
Cells_Cultured_fibroblasts
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)