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rs158038 chr21:18089813 G>T

Sequence
acaggatatttcaacacacttatt[G/T]caaatagaaatgagatagatgagt
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 1.98 -0.32 1.5·10-91.00 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd bipolar disorder chronic kidney disease ldl cholesterol total cholesterol waist hip ratio
GTEx eQTL Artery_Aorta Heart_Atrial_Appendage Nerve_Tibial Prostate

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