rs158214 chr5:56415464 C>T
- Sequence
ggaactacagccatcaccccattt[C/T]ccatgacaaacagcagggctctga
- ASB in cell types
- GM12878 (female B-cells) monocyte-derived macrophages periferal blood macrophages MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- MEF2B_HUMAN SKIL_HUMAN SPI1_HUMAN PKNX1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MEF2B_HUMAN | 1.93 | -2.18 | 1.33 | n/a | No Hit | |||
| SKIL_HUMAN | 2.25 | -2.32 | 1.00 | n/a | n/a | |||
| SPI1_HUMAN | 1.20 | 2.48 | 2.03 | n/a | No Hit | |||
| PKNX1_HUMAN | 1.57 | 1.64 | 1.67 | n/a | No Hit | |||
| COE1_HUMAN | 1.63 | -1.42 | 1.33 | n/a | No Hit |
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