ADASTRA v1.6.10
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rs15842
chr1:1013541
T
>
C
Sequence
ctcatctttgccagtacaggagct[T/C]gtgccgtggcccacagcccacagc
ASB in cell types
HEK293 (embryonic kidney)
HEK293T (embryonic kidney)
ASB for transcription factors
ZBT26_HUMAN
ZFHX2_HUMAN
KLF9_HUMAN
GLIS2_HUMAN
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZBT26_HUMAN
n/a
2.55
1.00
1.6·10
-3
2.00
n/a
n/a
ZFHX2_HUMAN
-2.08
2.13
1.00
0.01
2.00
n/a
n/a
KLF9_HUMAN
-2.09
2.17
1.00
0.02
2.00
n/a
No Hit
GLIS2_HUMAN
n/a
1.92
1.00
0.04
2.00
n/a
n/a
Items per page:
5
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Subcutaneous
,
Breast_Mammary_Tissue
,
Cells_Cultured_fibroblasts
,
Colon_Transverse
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Lung
,
Muscle_Skeletal
,
Spleen
,
Stomach
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)