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rs15944 chr17:57120887 A>T

Sequence
actttttaaattgcaactgtaaat[A/T]tgaaatggtcatcacatctgacct
ASB in cell types
VCaP (prostate carcinoma)
ASB for transcription factors
FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 2.30 -0.54 1.8·10-61.00 2.00 -3.68 Concordant
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Motif analysis

FOXA1_HUMAN Concordant
FOXA1_HUMAN pic

Genetic associations

GRASP bipolar disorder bipolar disorder and schizophrenia fasting blood glucose schizophrenia
GTEx eQTL Nerve_Tibial

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