rs160282 chr5:83563902 T>A
- Sequence
tatgatctgacctctcctaaggat[T/A]ttaggtggatgttgcacatttggc
- ASB in cell types
- T47D (invasive ductal carcinoma) HepG2 (hepatoblastoma) LNCaP (prostate carcinoma)
- ASB for transcription factors
- ESR1_HUMAN FOXA2_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 0.38 | 1.36 | 1.95 | n/a | No Hit | |||
| FOXA2_HUMAN | 0.03 | 0.67 | 1.33 | n/a | No Hit | |||
| ANDR_HUMAN | -0.10 | 0.69 | 1.42 | n/a | No Hit |
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