rs162558 chr2:38076937 T>C
- Sequence
gcaggaggaggcgaatctccgcgc[T/C]ccggcgaactttatcgggttgaag
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- SMC3_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC3_HUMAN | -0.05 | 1.05 | 1.10 | n/a | n/a | |||
| RAD21_HUMAN | -0.06 | 0.74 | 1.13 | n/a | n/a |
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