rs1636442 chr7:101688490 G>A
- Sequence
aggtcgagccgccgcttcccccgg[G/A]cgccgctaggtggcgccgcgctaa
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- SMC3_HUMAN CTCF_HUMAN RAD21_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC3_HUMAN | -0.51 | 1.64 | 2.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.26 | 1.04 | 1.73 | -0.47 | Weak Discordant | |||
| RAD21_HUMAN | -0.36 | 1.45 | 2.00 | n/a | n/a |
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Motif analysis
