rs164585 chr1:162423160 G>A
- Sequence
cactccagcctgagcaacaagagc[G/A]gaactccatctaaaaaaaaaaaaa
- ASB in cell types
- K562 (myelogenous leukemia) monocyte-derived macrophages CD34+ hematopoietic stem progenitor cells
- ASB for transcription factors
- SPI1_HUMAN IKZF1_HUMAN RING2_HUMAN NRF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.35 | -0.24 | 2.08 | -2.23 | Concordant | |||
| IKZF1_HUMAN | 1.83 | -3.55 | 3.00 | n/a | No Hit | |||
| RING2_HUMAN | 2.31 | n/a | 3.00 | n/a | n/a | |||
| NRF1_HUMAN | 1.48 | -1.51 | 3.00 | n/a | No Hit |
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Motif analysis
