ADASTRA v1.6.10
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rs164725
chr3:6615546
A
>
G
Sequence
gtgtttaatgagtaacattagcac[A/G]ctcttaaaaaacactaataacaaa
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
FOXA1_HUMAN
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Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN
0.87
0.32
2.3·10
-3
1.00
1.47
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
aortic valve calcium
,
systolic blood pressure (sbp)
,
triglycerides
GTEx eQTL
Colon_Transverse
,
Pituitary
,
Spleen
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)