rs165527 chr10:17258229 T>G
- Sequence
agcaagaagaatgggaagcaatat[T/G]gctcagtcagaagataaacctgtg
- ASB in cell types
- PC9 (lung adenocarcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.99 | 0.78 | 1.31 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Breast_Mammary_Tissue, Esophagus_Mucosa, Muscle_Skeletal, Nerve_Tibial, Pituitary, Prostate, Spleen, Testis, Thyroid, Whole_Blood