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rs166230 chr3:64067531 T>C

Sequence
gttttgcttgggctaattggtaaa[T/C]attagctttcattctctgagcaac
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 1.13 -0.74 0.011.00 2.89 1.01 Weak Discordant
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Motif analysis

FOXA1_HUMAN Weak Discordant
FOXA1_HUMAN pic

Genetic associations

GRASP fasting blood glucose total cholesterol type 2 diabetes
Finemapping type 2 diabetes
GTEx eQTL Testis Whole_Blood

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