rs1669778 chr2:236642636 C>T
- Sequence
ctcagtgagtggtaaacgtctgag[C/T]cactcgtggaatattacaaccacg
- ASB in cell types
- sigmoid colon coronary artery smooth muscle
- ASB for transcription factors
- EP300_HUMAN JUN_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EP300_HUMAN | -0.61 | 1.47 | 1.57 | n/a | n/a | |||
| JUN_HUMAN | n/a | 1.66 | 1.33 | 3.96 | Concordant |
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Motif analysis
