rs167679 chr7:95684258 A>G
- Sequence
caaaagagatattccatgattaaa[A/G]tggcccctacaggacaaattgaga
- ASB in cell types
- neural cell pancreas Peyer's patch heart left ventricle
- ASB for transcription factors
- CTCF_HUMAN SMC3_HUMAN RAD21_HUMAN REST_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.28 | 1.58 | 1.45 | 2.41 | Concordant | |||
| SMC3_HUMAN | 0.09 | 2.92 | 1.78 | n/a | n/a | |||
| RAD21_HUMAN | -0.18 | 1.78 | 1.61 | n/a | n/a | |||
| REST_HUMAN | -2.84 | 2.11 | 1.42 | n/a | No Hit |
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Motif analysis
