rs1684456 chr3:196624792 A>G
- Sequence
ctttaagccccttcctcctttttc[A/G]ctgaattgagatttcacgggcaca
- ASB in cell types
- GM12878 (female B-cells) monocyte-derived dendritic cells
- ASB for transcription factors
- SPI1_HUMAN IKZF2_HUMAN FOXK2_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | -0.95 | 2.01 | 2.17 | n/a | No Hit | |||
| IKZF2_HUMAN | -0.78 | 1.20 | 1.33 | n/a | n/a | |||
| FOXK2_HUMAN | n/a | 1.51 | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Nerve_Tibial