rs168448 chr20:64221222 A>T
- Sequence
acacatgcgagtgcctgtcaggac[A/T]ggattttgagctctggttacagca
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- RARA_HUMAN NFIL3_HUMAN NR2F6_HUMAN BCL6_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RARA_HUMAN | -3.35 | 2.96 | 1.33 | n/a | No Hit | |||
| NFIL3_HUMAN | n/a | 2.74 | 1.50 | n/a | n/a | |||
| NR2F6_HUMAN | -2.07 | 2.29 | 1.33 | n/a | n/a | |||
| BCL6_HUMAN | n/a | 2.47 | 1.33 | n/a | No Hit | |||
| COT1_HUMAN | -1.69 | 1.93 | 1.33 | n/a | No Hit |
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Motif analysis
