Attention! You are using release Soos. You can switch to the latest ADASTRA version: adastra.autosome.org

rs16862355 chr1:18909164 T>C

Sequence
taaccacactgggttctgggggtt[T/C]gaggagttaaaggtctgaaaggca
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
ARI1B_HUMAN NCOR1_HUMAN TAL1_HUMAN HTF4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ARI1B_HUMAN 1.28 n/a 1.1·10-81.00 1.33 n/a n/a
NCOR1_HUMAN 1.48 -1.23 4.9·10-61.00 1.33 n/a n/a
TAL1_HUMAN 1.43 0.15 2.7·10-51.00 1.56 n/a No Hit
HTF4_HUMAN 1.52 -2.38 1.7·10-41.00 1.33 n/a No Hit
RING2_HUMAN 1.83 -2.09 2.2·10-31.00 1.33 n/a n/a
Items per page:
1 – 5 of 12

Motif analysis

No data available

Genetic associations

No data available

Download