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rs16880872 chr5:53096187 G>A

Sequence
cttgagagatcttcactgtaccag[G/A]tgctcagtaactgtgtaagatgtc
ASB in cell types
foreskin keratinocyte

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
foreskin keratinocyte n/a 0.44 1.000.02 2.67
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol height ldl cholesterol triglycerides
GTEx eQTL Adipose_Subcutaneous Artery_Tibial Brain_Cerebellar_Hemisphere Brain_Cerebellum Brain_Cortex Brain_Frontal_Cortex_BA9 Brain_Spinal_cord_cervical_c-1 Lung Muscle_Skeletal Nerve_Tibial

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