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rs16894463 chr6:41319744 T>C

Sequence
ggttccctgtctgtaaaatgcaga[T/C]tctctcctatgaaatctctgaggt
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN 2.17 -2.21 2.3·10-31.00 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP lp-pla2 mass
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Tibial Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Lung Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Thyroid Whole_Blood

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