rs16950044 chr12:120291671 A>C
- Sequence
caacaaccaaaaaactatcatagg[A/C]acagctcataacttatcaaaccaa
- ASB in cell types
- HepG2 (hepatoblastoma) LoVo (colorectal adenocarcinoma)
- ASB for transcription factors
- DLX1_HUMAN CREB1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| DLX1_HUMAN | 2.06 | -1.74 | 2.00 | n/a | n/a | |||
| CREB1_HUMAN | 1.11 | -0.09 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Brain_Putamen_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Liver, Lung, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Testis, Thyroid, Whole_Blood