rs16983293 chr20:62847704 A>G
- Sequence
aggccctccagtggccatgttcaa[A/G]aacagaatgaaaatccgtatgtag
- ASB in cell types
- HEK293 (embryonic kidney) K562 (myelogenous leukemia) HepG2 (hepatoblastoma)
- ASB for transcription factors
- ZFHX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZFHX2_HUMAN | -3.20 | 2.29 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, fasting blood glucose, microalbuminuria, resistance to kuru in aged women despite likely exposure, urinary albumin-to-creatinine ratio
GTEx eQTL Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg