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rs16989279 chr22:31561697 G>A

Sequence
gcagtatactctgatttcctcgtt[G/A]ctgttttcctacagcaaatcagaa
ASB in cell types
VCaP (prostate carcinoma)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN n/a 2.37 1.007.7·10-3 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose hdl cholesterol height
GTEx eQTL Adipose_Subcutaneous Artery_Tibial Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Heart_Left_Ventricle Muscle_Skeletal Nerve_Tibial Skin_Sun_Exposed_Lower_leg Testis

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