rs16994003 chr20:48658595 T>C
- Sequence
actcattcagtcaacagacattga[T/C]tgagatgctgcccatcacacgggc
- ASB in cell types
- VCaP (prostate carcinoma) T47D (invasive ductal carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN PRGR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.45 | 1.70 | 1.50 | n/a | No Hit | |||
| PRGR_HUMAN | -0.26 | 1.49 | 1.58 | n/a | No Hit |
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