Attention! You are using release Soos. You can switch to the latest ADASTRA version: adastra.autosome.org

rs170209 chr17:3732351 A>G

Sequence
gcagggtggtgagaagagcgaatc[A/G]gtccaaaccgactcacagatgacc
ASB in cell types
LNCaP (prostate carcinoma) GM12878 (female B-cells)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.85 0.70 6.6·10-40.88 1.36 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP eye color spine bone mineral density (bmd)
GTEx eQTL Brain_Cerebellar_Hemisphere Brain_Cerebellum

Download