ADASTRA v1.6.10
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adastra.autosome.org
rs17032699
chr2:106270015
A
>
G
Sequence
ggagggcgttgccagagcagcatc[A/G]taaagtacataggtctgcccacgt
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
SP2_HUMAN
CTCF_HUMAN
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Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SP2_HUMAN
-2.55
2.29
1.00
7.9·10
-4
1.33
n/a
No Hit
CTCF_HUMAN
-0.08
0.72
1.00
0.04
1.45
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
diabetic retinopathy in type 2 diabetes mellitus
,
ldl cholesterol
,
total cholesterol
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Aorta
,
Artery_Tibial
,
Heart_Atrial_Appendage
,
Nerve_Tibial
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)