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rs17038906 chr12:106974722 G>C

Sequence
cctgtatgcttgattgaccaggct[G/C]tctgacttgcagcttaccggaagt
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
SRF_HUMAN IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SRF_HUMAN -1.75 1.53 1.002.4·10-3 1.33 n/a No Hit
IKZF1_HUMAN -0.08 1.38 0.810.05 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy) urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Tibial Brain_Frontal_Cortex_BA9 Breast_Mammary_Tissue Cells_Cultured_fibroblasts Esophagus_Muscularis Nerve_Tibial Pancreas Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis Thyroid

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