rs17054397 chr5:157253866 A>G
- Sequence
catgagagtgcctactctggcttg[A/G]gcacttctatatgcaaggtgaata
- ASB in cell types
- VCaP (prostate carcinoma) A549 (lung carcinoma) K562 (myelogenous leukemia)
- ASB for transcription factors
- CEBPG_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPG_HUMAN | 2.38 | -3.27 | 2.00 | n/a | No Hit | |||
| CTCF_HUMAN | 0.87 | -0.06 | 1.79 | n/a | No Hit |
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