ADASTRA v1.6.10
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rs17103212
chr14:35340038
T
>
C
Sequence
ttctgtgtttatggctagaaattc[T/C]gcagcagctgcatttctcagtatc
ASB in cell types
monocyte-derived macrophages
GM12878 (female B-cells)
ASB for transcription factors
SPI1_HUMAN
TF65_HUMAN
FOXK2_HUMAN
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View in UCSC Genome Browser
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN
-0.37
1.66
1.00
7.4·10
-4
2.43
n/a
No Hit
TF65_HUMAN
n/a
2.30
1.00
0.01
2.50
n/a
No Hit
FOXK2_HUMAN
-1.96
1.95
1.00
0.02
1.50
n/a
n/a
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration (choroidal neovascularization) vs. no amd
,
age at death with kuru exposure
,
college completion
,
height
,
rheumatoid arthritis
GTEx eQTL
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Lung
,
Muscle_Skeletal
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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log2(Alt/Ref motif p-value)