ADASTRA v1.6.10
Search
Browse
Annotate
Help
Downloads
About
Attention!
You are using release
Soos
. You can switch to the latest ADASTRA version:
adastra.autosome.org
rs17105151
chr14:77009204
C
>
T
Sequence
agcacattactcacaacccaactc[C/T]gttcctgccgcagccagagactca
ASB in cell types
SK-BR-3 (breast adenocarcinoma)
T47D (invasive ductal carcinoma)
ASB for transcription factors
AP2C_HUMAN
ESR1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
AP2C_HUMAN
2.34
n/a
2.5·10
-3
1.00
2.00
n/a
No Hit
ESR1_HUMAN
1.73
0.54
0.05
0.68
2.00
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
diastolic blood pressure (dbp)
,
systolic blood pressure (sbp)
,
triglycerides
GTEx eQTL
Cells_Cultured_fibroblasts
,
Esophagus_Muscularis
,
Heart_Atrial_Appendage
,
Nerve_Tibial
Download
Download page in JSON
Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)