rs17111 chr16:84823638 A>G
- Sequence
gccctgccttctaccccaggctgt[A/G]caatgacgagtactcttggacaaa
- ASB in cell types
- K562 (myelogenous leukemia) LHSAR (prostate epithelial cells)
- ASB for transcription factors
- CEBPB_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPB_HUMAN | -2.44 | 1.96 | 2.50 | n/a | No Hit | |||
| ANDR_HUMAN | 0.34 | 1.80 | 1.50 | n/a | No Hit |
Items per page:
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP chronic kidney disease, cystatin c in serum, nonsyndromic striae distensae (stretch marks), schizophrenia
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid