rs17129542 chr10:112140240 T>C
- Sequence
ccgtcagtgataagctgcagttgc[T/C]aagaagcaccccaggaggcgtcca
- ASB in cell types
- A549 (lung carcinoma) HepG2 (hepatoblastoma)
- ASB for transcription factors
- RAD21_HUMAN CTCF_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 1.21 | -0.25 | 1.81 | n/a | n/a | |||
| CTCF_HUMAN | 0.83 | 0.43 | 1.45 | n/a | No Hit | |||
| SMC3_HUMAN | 0.81 | -0.24 | 2.00 | n/a | n/a |
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