ADASTRA v1.6.10
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rs171592
chr5:14208811
A
>
G
Sequence
gagctgtttctgtacctcacttct[A/G]ttttctgttcataagtgttaccta
ASB in cell types
foreskin keratinocyte
GM12878 (female B-cells)
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Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
foreskin keratinocyte
1.85
n/a
2.6·10
-4
1.00
2.75
GM12878 (female B-cells)
0.50
0.58
0.98
8.1·10
-3
1.28
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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