Attention! You are using release Soos. You can switch to the latest ADASTRA version: adastra.autosome.org

rs171780 chr5:16627016 C>G

Sequence
gaagacctgggccacatggaaaaa[C/G]tgttgcaactgataccaaagtttg
ASB in cell types
breast tumor tissue MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
ESR1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN 1.78 1.41 1.007.0·10-3 2.19 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Aorta Heart_Atrial_Appendage Whole_Blood

Download