rs17207142 chr19:53520824 C>T
- Sequence
caaggcaggacgcccttagggtcg[C/T]gtagagttgcatgctgggaaatcc
- ASB in cell types
- GM12878 (female B-cells) K562 (myelogenous leukemia) fetal bone marrow-derived mononuclear cells HepG2 (hepatoblastoma)
- ASB for transcription factors
- KMT2A_HUMAN CREB1_HUMAN ZN143_HUMAN ZN687_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KMT2A_HUMAN | -3.43 | 2.57 | 1.50 | n/a | n/a | |||
| CREB1_HUMAN | 1.26 | -0.55 | 1.33 | n/a | No Hit | |||
| ZN143_HUMAN | 1.42 | -0.22 | 1.78 | n/a | No Hit | |||
| ZN687_HUMAN | 0.97 | -1.80 | 1.33 | n/a | n/a | |||
| IKZF2_HUMAN | 1.35 | -0.85 | 1.33 | n/a | n/a |
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