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rs17215 chr7:142740123 G>C

Sequence
aagagccacacggttccaccaggg[G/C]gaagactgatttttgcatatcatg
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.80 -1.59 0.021.00 1.50 -5.20 Concordant
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Motif analysis

CTCF_HUMAN Concordant
CTCF_HUMAN pic

Genetic associations

GTEx eQTL Lung Whole_Blood

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