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rs17245346 chr11:1693417 C>T

Sequence
tctcggccagcccgggccgcagga[C/T]ctgcagtctcgtttccccaggaat
ASB in cell types
A549 (lung carcinoma) neutrophils PC3 (prostate carcinoma)
ASB for transcription factors
RAD21_HUMAN SMC3_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN 1.03 0.49 0.010.50 1.77 n/a n/a
SMC3_HUMAN 1.02 -0.02 0.020.56 1.99 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP chronic kidney disease diastolic blood pressure (dbp) height serum creatinine systolic blood pressure (sbp)
GTEx eQTL Liver Spleen

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