rs1725474 chr19:38093732 A>G
- Sequence
agcctgccccagatggccgtcccc[A/G]gccgccaagcagacagtctcgagt
- ASB in cell types
- K562 (myelogenous leukemia)
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | 0.11 | 1.34 | 2.00 |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, body mass index (bmi), neuroblastoma (brain cancer), transmission distortion
GTEx eQTL Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Breast_Mammary_Tissue, Colon_Sigmoid, Esophagus_Muscularis, Lung, Muscle_Skeletal, Pancreas, Pituitary, Thyroid