ADASTRA v1.6.10
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rs172787
chr16:3183737
C
>
A
Sequence
tgacaccccgccacatacattact[C/A]cccgcaataccatgcaattttaag
ASB in cell types
K562 (myelogenous leukemia)
MCF7 (Invasive ductal breast carcinoma)
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View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia)
-0.19
0.81
1.00
6.1·10
-17
2.01
MCF7 (Invasive ductal breast carcinoma)
-0.52
0.78
1.00
0.03
2.14
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
hdl cholesterol change with statins
GTEx eQTL
Artery_Aorta
,
Brain_Frontal_Cortex_BA9
,
Esophagus_Mucosa
,
Heart_Left_Ventricle
,
Muscle_Skeletal
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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