rs172998 chr4:2798802 A>T
- Sequence
ggcctcaggcgttcccaggctgag[A/T]cctctaggaacacaggtgctgggt
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) breast tumour metastasis K562 (myelogenous leukemia)
- ASB for transcription factors
- ESR1_HUMAN CLOCK_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | -0.53 | 1.38 | 2.02 | n/a | No Hit | |||
| CLOCK_HUMAN | -2.61 | 2.10 | 2.00 | n/a | No Hit |
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