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rs173567 chr5:151239268 T>C

Sequence
ggcgtgaaacaccaccacatccag[T/C]tccacgcagtttttttttaataaa
ASB in cell types
foreskin keratinocyte GM12878 (female B-cells)
ASB for transcription factors
CTCF_HUMAN IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.04 0.30 9.3·10-81.00 1.16 n/a No Hit
IKZF1_HUMAN n/a 2.12 1.001.5·10-3 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP aortic valve calcium
GTEx eQTL Adipose_Visceral_Omentum Colon_Transverse Esophagus_Mucosa Ovary Skin_Not_Sun_Exposed_Suprapubic Testis

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