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rs17388437 chr1:85427706 T>C

Sequence
cagtgtaaatattttgtttctctc[T/C]aaggatgtaacaaagaaagagaga
ASB in cell types
VCaP (prostate carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
VCaP (prostate carcinoma) -0.14 1.05 1.002.0·10-3 2.00
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy) asthma body mass index (bmi) hdl cholesterol change with statins neuroblastoma (brain cancer) obesity with early age of onset (age >2)
GTEx eQTL Artery_Tibial Esophagus_Mucosa Skin_Not_Sun_Exposed_Suprapubic

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