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rs17414093 chr15:50100640 G>C

Sequence
ctgatgtcatctaaagatgtgtca[G/C]tcccactcatgatgatacaaatga
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
CREB1_HUMAN P53_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CREB1_HUMAN -1.14 1.92 1.002.9·10-3 3.11 n/a No Hit
P53_HUMAN n/a 2.62 1.000.04 2.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP abnormal involuntary movement scale tardive dyskinesia
GTEx eQTL Adipose_Subcutaneous Artery_Tibial Cells_Cultured_fibroblasts Esophagus_Mucosa Esophagus_Muscularis Lung Muscle_Skeletal Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Thyroid Whole_Blood

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