rs174680 chr22:19947476 T>C
- Sequence
gggggcagggtaaggagtgtgagc[T/C]atctccagtgacaggtaaggtcac
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney)
- ASB for transcription factors
- PKNX1_HUMAN ARI1B_HUMAN REST_HUMAN ARNT_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PKNX1_HUMAN | 4.10 | n/a | 4.00 | n/a | No Hit | |||
| ARI1B_HUMAN | 3.90 | n/a | 4.00 | n/a | n/a | |||
| REST_HUMAN | 3.61 | n/a | 4.00 | n/a | No Hit | |||
| ARNT_HUMAN | 1.89 | n/a | 4.00 | n/a | No Hit | |||
| REQU_HUMAN | 3.00 | n/a | 4.00 | n/a | n/a |
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