rs175102 chr11:61043285 G>A
- Sequence
cagggtggtttccagtttggggct[G/A]ttaacgagcagtgctgacgtgagc
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- ARNT_HUMAN IKZF1_HUMAN IKZF2_HUMAN TBX21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ARNT_HUMAN | 2.71 | n/a | 1.00 | n/a | No Hit | |||
| IKZF1_HUMAN | 2.59 | -3.00 | 1.33 | n/a | No Hit | |||
| IKZF2_HUMAN | 2.46 | -2.74 | 1.33 | n/a | n/a | |||
| TBX21_HUMAN | 2.53 | n/a | 1.33 | -7.08 | Concordant | |||
| NFAC3_HUMAN | 2.67 | -3.03 | 1.33 | n/a | No Hit |
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Motif analysis
