rs17513917 chr1:91739640 C>T
- Sequence
gttgttcagccaactaccaaggga[C/T]ctcacagaaccttcctcatctttg
- ASB in cell types
- LHSAR (prostate epithelial cells) PC3 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | -0.49 | 1.92 | 1.70 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP asthma, fasting blood glucose, late onset alzheimers disease, longstanding arthritis, partial epilepsy, schizophrenia, tetrology of fallot