rs17515291 chr8:18061477 A>G
- Sequence
gaatacctggaagagatgaacaca[A/G]tgtcaggaaccggaagaggtgaca
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- NFIC_HUMAN ZBT40_HUMAN AFF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFIC_HUMAN | n/a | 3.10 | 2.00 | n/a | No Hit | |||
| ZBT40_HUMAN | n/a | 2.56 | 2.00 | n/a | n/a | |||
| AFF1_HUMAN | n/a | 2.16 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, fasting blood glucose, hdl cholesterol change with statins, height, ldl cholesterol, partial epilepsy, total cholesterol
GTEx eQTL Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hippocampus, Brain_Hypothalamus, Brain_Spinal_cord_cervical_c-1, Cells_Cultured_fibroblasts, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Thyroid, Whole_Blood