rs1752022 chr1:15245030 T>C
- Sequence
gagatcacatgatgagagaggaag[T/C]gagagtgagcgagggggaggtgcc
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells) germinal center B-cells monocyte-derived macrophages
- ASB for transcription factors
- MITF_HUMAN BCL6_HUMAN ZN143_HUMAN LMBL2_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MITF_HUMAN | 2.13 | 0.03 | 1.50 | n/a | No Hit | |||
| BCL6_HUMAN | 1.93 | -0.71 | 2.00 | n/a | No Hit | |||
| ZN143_HUMAN | 1.79 | -1.86 | 1.00 | n/a | No Hit | |||
| LMBL2_HUMAN | 1.79 | -1.86 | 1.00 | n/a | n/a | |||
| BHE40_HUMAN | 1.25 | -1.52 | 1.33 | n/a | No Hit |
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Motif analysis
