rs17605348 chr17:47240133 T>C
- Sequence
tcacagtcatctctctgtttgtca[T/C]cctttcaaggaaaagctgtatccc
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney) HAEC (human aortic endothelial cells) 786-O (renal carcinoma)
- ASB for transcription factors
- JUN_HUMAN IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 2.23 | -0.68 | 1.61 | n/a | No Hit | |||
| IKZF1_HUMAN | 1.31 | 0.30 | 1.62 | n/a | No Hit |
Items per page:
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Coronary, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Thyroid