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rs176095 chr6:32190542 A>G

Sequence
ctgggttcaccggcagctcagttc[A/G]tatttcttgttctaatgactcccc
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
FOXK2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXK2_HUMAN 1.70 -1.37 0.021.00 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

EMBL-EBI atopic dermatitis
GRASP advanced age-related macular degeneration (geographic atrophy) asthma asthma, childhood onset asthma, childhood, later and unknown onset, and severe and industrial asthma asthma, later onset atopic dermatitis atopic dermatitis with bronchial asthma college completion fasting insulin height homa-b homa-ir idiopathic membranous nephropathy intracranial aneurysm ldl cholesterol rheumatoid arthritis rheumatoid arthritis (acpa-positive) total cholesterol triglycerides waist hip ratio
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Adrenal_Gland Artery_Aorta Artery_Coronary Artery_Tibial Brain_Amygdala Brain_Caudate_basal_ganglia Brain_Cerebellar_Hemisphere Brain_Cerebellum Brain_Cortex Brain_Frontal_Cortex_BA9 Brain_Hippocampus Brain_Hypothalamus Brain_Nucleus_accumbens_basal_ganglia Brain_Putamen_basal_ganglia Breast_Mammary_Tissue Cells_Cultured_fibroblasts Cells_EBV-transformed_lymphocytes Colon_Sigmoid Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Kidney_Cortex Liver Lung Muscle_Skeletal Nerve_Tibial Pancreas Pituitary Prostate Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Small_Intestine_Terminal_Ileum Spleen Stomach Testis Thyroid Vagina Whole_Blood

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