rs176501 chr7:106112245 G>A
- Sequence
ggagggagagagagtcaggacgac[G/A]gggcggaggaggggaccgacgaga
- ASB in cell types
- A549 (lung carcinoma) CD14+ monocytes
- ASB for transcription factors
- STAT1_HUMAN JUN_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 1.89 | n/a | 2.50 | n/a | No Hit | |||
| JUN_HUMAN | -0.20 | 0.94 | 2.00 | n/a | No Hit | |||
| CTCF_HUMAN | 0.46 | 0.62 | 1.29 | -0.23 | Weak Discordant |
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Motif analysis
